- BIOBASE
The focus of the GBF project "Molecular Bioinformatics of Gene Regulation" are regulatory genomic signals and regions that govern transcriptional control based on TRANSFAC - The Transcription Factor Database. It compiles data about gene regulatory DNA sequences and protein factors binding to and acting through them.
http://www.gene-regulation.com/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - BioGIS: Israel Biodiversity Information System
Israel Biodiversity Information System (BioGIS) is a Geographical Information System established to create a national database of the flora and fauna of Israel. The system is open to the public and provides advanced tools for querying, analyzing, modeling, and visualizing patterns of species distribution.
http://www.biogis.huji.ac.il/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - CUBIC: Columbia University Bioinformatics Center
Features PredictProtein service for sequence analysis and protein structure prediction, META for single-page interface to validated sequence analysis, PredictNLS for prediction and analysis of nuclear localization signals, EVA for evaluation of automatic protein structure prediction servers, and DSSPcont for continuous assignment of protein secondary structure.
http://cubic.bioc.columbia.edu/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - INCBI Irish National Centre for BioInformatics
Hosts Irish embnet node, Gives links to Database browsing and interrogation at SRS, European (EBI) servers, Blast server for parasite genomes (EBI), US (NCBI) servers, Protein structure prediction, PredictProtein Server in Heidelberg, Gene identification, splice sites, exons, introns and a list of gene structure prediction programs
http://acer.gen.tcd.ie/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - PEDANT
Completely automatic and exhaustive analysis of protein sequence sets - from individual sequences to complete genomes
http://pedant.gsf.de/
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Review It - SA National Bioinformatics Institute
SANBI aims to bring genome information, computational biology, and analytical tools to the South African research community. Hosts SA National EMBNet Node, provides links to Sequence Retrieval System (SRS), GeneKraal, and TB Genomes Analysis Server. Research in Sequence Tag Alignment and Consensus Knowledgebase (STACK). Databases include BLAST search in Mycobacterium genome.
http://www.sanbi.ac.za/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - Scansite
Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein kinases or bind to domains such as SH2 domains, 14-3-3 domains or PDZ domains.
http://scansite.mit.edu/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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