- GDE for Linux
An integrated linux environment for bioinformatics and evolutionary analysis based on the Genetic Data Environment (GDE). Contains binaries for Linux and Mac OS X, documentation, screenshots, references, and organism specific interfaces.
http://www.bioafrica.net/GDElinux/index.html
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - Gints
Object-oriented regulation network simulator written in Java. Includes downloadable software and documentation. The site is in French and English.
http://gints.free.Fr
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - NCBI BLAST
BLAST (Basic Local Alignment Search Tool) is a set of similarity search programs designed to explore all of the available sequence databases regardless of whether the query is protein or DNA.
http://www.ncbi.nlm.nih.gov/BLAST/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - Sight
Extendable parallel system for automatic genome analysis. Software for analysing all potential genes in a defined genome region. Given two marker names, can output reports of genomic features between them. Features for converting between naming systems, sequence retrieval, E-PCR, gene prediction, similarity search, protein pattern search, and report formatting. Written in Java.
http://bioinformatics.org/jSight/
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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Review It - The ARB Project
A free sequence database application for Unix. It includes a sequence editor, several sequence aligners, phylogeny reconstruction tools, probe/primer search and generation, genome annotation and visualization. In addition to the integrated user-interface the ARB database can be accessed using Perl or C.
http://www.arb-home.de
(Added: Thu Jan 01 2004 Hits: 0 Rating: 0.00 Votes: 0)
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